ALMaSS: /builds/ALMaSS/ALMaSS_MIDox/Aphid/Aphid_Population

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#include <string.h>
#include <cstring>
#include <iostream>
#include <fstream>
#include <vector>
#include "math.h"
#include "../BatchALMaSS/ALMaSS_Setup.h"
#include "../ALMaSSDefines.h"
#include "../Landscape/ls.h"
#include "../BatchALMaSS/PopulationManager.h"
#include "../SubPopulation/SubPopulation.h"
#include "../SubPopulation/SubPopulation_Population_Manager.h"
#include "../Aphid/Aphid.h"
#include "../Aphid/Aphid_Population_Manager.h"

Variables
Landscape *	g_landscape_ptr

FarmManager *	g_farmmanager

CfgStr	cfg_AphidSpeciesName ("APHID_SPECIES_NAME", CFG_CUSTOM, "English grain aphid")
	This variable decides which aphid species to run. The default one is the English grain aphid. More...

CfgStr	cfg_AphidResultPath ("APHID_RESULT_PATH", CFG_CUSTOM, "./")
	The path to store the results. More...

CfgStr	cfg_AphidResultFileSuffix ("APHID_RESULT_FILE_SUFFIX", CFG_CUSTOM, "_result")
	The suffix of the file name for storing the results. More...

CfgFloat	cfg_AphidMaxShortDistance ("APHID_MAX_SHORT_DISTANCE", CFG_CUSTOM, 1000)
	The longest distance that an aphid with wings can fly. More...

CfgFloat	cfg_AphidMaxLongDistance ("APHID_MAX_LONG_DISTANCE", CFG_CUSTOM, 1500)
	The longest distance that an aphid WITHOUT wings can fly. (meters) More...

CfgFloat	cfg_AphidPeakLongDistance ("APHID_PEAK_LONG_DISTANCE", CFG_CUSTOM, 200)
	The distance for the peak amount when the winged adults fly. (meters) More...

CfgFloat	cfg_AphidScaleWindSpeed ("APHID_SCALE_WIND_SPEED", CFG_CUSTOM, 1.01)
	The scale for the wind speed. More...

CfgFloat	cfg_AphidMaxWindSpeed ("APHID_MAX_WIND_SPEED", CFG_CUSTOM, 10)
	The maximum speed that allows an aphid to fly. More...

CfgFloat	cfg_AphidMovMaskWindDirectionNum ("APHID_MOV_MASK_WIND_DIRECTION_NUM", CFG_CUSTOM, 4)
	The number of wind directions used to calculate the movement masks. More...

CfgFloat	cfg_AphidMovMaskWindSpeedStepSize ("APHID_MOV_MASK_WIND_SPEED_STEP_SIZE", CFG_CUSTOM, 2)
	The sampling number of wind speed used to calculate the movement masks. More...

CfgInt	cfg_AphidLifeStageNum ("APHID_LIFE_STAGE_NUM", CFG_CUSTOM, 9)
	The number of life stages for the aphids. All the species have the same number of life stages. More...

CfgInt	cfg_AphidMaxAliveDay ("APHID_MAX_ALIVE_DAY", CFG_CUSTOM, 200)
	The maximum alive days among all the life stages. All the species have the same number of life stages. More...

CfgArray_Int	cfg_AphidEggStartingNumVec ("APHID_EGG_STARING_NUM_VEC", CFG_CUSTOM, 4, vector< int >{20000, 20000, 20000, 20000})
	It controls the number of eggs to start the aphid simulations. All the aphid species use the same parameters. More...

CfgArray_Double	cfg_AphidLandingSurvivalRateVec ("APHID_LANDING_SURVIVAL_RATE_VEC", CFG_CUSTOM, 4, vector< double >{1.0, 1.0, 1.0, 1.0})
	The survival rate of landing for flying. More...

CfgInt	cfg_AphidCellWidth ("APHID_CELL_WIDTH", CFG_CUSTOM, 10)
	The width of the cell on the landscape for the aphids. -x , all the aphid species use the same parameter. More...

CfgInt	cfg_AphidCellHeight ("APHID_CELL_HEIGHT", CFG_CUSTOM, 10)
	The height of the cell on the landscape for the aphids. -y, all the aphid species use the same parameter. More...

CfgFloat	cfg_EGAphidEggMortalityRate ("EG_APHID_EGG_MORALITY_RATE", CFG_CUSTOM, 0.00595)
	The morality rate for Aphid eggs. More...

CfgFloat	cfg_EGAphidEggMortalityRateStd ("EG_APHID_EGG_MORALITY_RATE_STD", CFG_CUSTOM, 0.00024)

CfgFloat	cfg_PEAAphidEggMortalityRate ("PEA_APHID_EGG_MORALITY_RATE", CFG_CUSTOM, 0.00595)

CfgFloat	cfg_PEAAphidEggMortalityRateStd ("PEA_APHID_EGG_MORALITY_RATE_STD", CFG_CUSTOM, 0.00024)

CfgFloat	cfg_BBAphidEggMortalityRate ("BB_APHID_EGG_MORALITY_RATE", CFG_CUSTOM, 0.00595)

CfgFloat	cfg_BBAphidEggMortalityRateStd ("BB_APHID_EGG_MORALITY_RATE_STD", CFG_CUSTOM, 0.00024)

CfgFloat	cfg_PPAphidEggMortalityRate ("PP_APHID_EGG_MORALITY_RATE", CFG_CUSTOM, 0.00595)

CfgFloat	cfg_PPAphidEggMortalityRateStd ("PP_APHID_EGG_MORALITY_RATE_STD", CFG_CUSTOM, 0.00024)

CfgFloat	cfg_EGAphidNymphMortalityParaA ("EG_APHID_NYMPH_MORTALITY_PARA_A", CFG_CUSTOM, 0.0004)
	The temperature related morality rate for Aphid nymphs and adults. More...

CfgFloat	cfg_EGAphidNymphMortalityParaB ("EG_APHID_NYMPH_MORTALITY_PARA_B", CFG_CUSTOM, -0.0115)

CfgFloat	cfg_EGAphidNymphMortalityParaC ("EG_APHID_NYMPH_MORTALITY_PARA_C", CFG_CUSTOM, 0.0906)

CfgFloat	cfg_PEAAphidNymphMortalityParaA ("PEA_APHID_NYMPH_MORTALITY_PARA_A", CFG_CUSTOM, 0.0004)

CfgFloat	cfg_PEAAphidNymphMortalityParaB ("PEA_APHID_NYMPH_MORTALITY_PARA_B", CFG_CUSTOM, -0.0115)

CfgFloat	cfg_PEAAphidNymphMortalityParaC ("PEA_APHID_NYMPH_MORTALITY_PARA_C", CFG_CUSTOM, 0.0906)

CfgFloat	cfg_BBAphidNymphMortalityParaA ("BB_APHID_NYMPH_MORTALITY_PARA_A", CFG_CUSTOM, 0.0025)

CfgFloat	cfg_BBAphidNymphMortalityParaB ("BB_APHID_NYMPH_MORTALITY_PARA_B", CFG_CUSTOM, -0.059)

CfgFloat	cfg_BBAphidNymphMortalityParaC ("BB_APHID_NYMPH_MORTALITY_PARA_C", CFG_CUSTOM, 0.3081)

CfgFloat	cfg_PPAphidNymphMortalityParaA ("PP_APHID_NYMPH_MORTALITY_PARA_A", CFG_CUSTOM, 0.0025)

CfgFloat	cfg_PPAphidNymphMortalityParaB ("PP_APHID_NYMPH_MORTALITY_PARA_B", CFG_CUSTOM, -0.059)

CfgFloat	cfg_PPAphidNymphMortalityParaC ("PP_APHID_NYMPH_MORTALITY_PARA_C", CFG_CUSTOM, 0.3081)

CfgFloat	cfg_EGAphidAdultMortalityParaA ("EG_APHID_ADULT_MORTALITY_PARA_A", CFG_CUSTOM, 0.0004)
	The temperature related morality rate for Aphid adults. More...

CfgFloat	cfg_EGAphidAdultMortalityParaB ("EG_APHID_ADULT_MORTALITY_PARA_B", CFG_CUSTOM, -0.0115)

CfgFloat	cfg_EGAphidAdultMortalityParaC ("EG_APHID_ADULT_MORTALITY_PARA_C", CFG_CUSTOM, 0.0906)

CfgFloat	cfg_PEAAphidAdultMortalityParaA ("PEA_APHID_ADULT_MORTALITY_PARA_A", CFG_CUSTOM, 0.0004)

CfgFloat	cfg_PEAAphidAdultMortalityParaB ("PEA_APHID_ADULT_MORTALITY_PARA_B", CFG_CUSTOM, -0.0115)

CfgFloat	cfg_PEAAphidAdultMortalityParaC ("PEA_APHID_ADULT_MORTALITY_PARA_C", CFG_CUSTOM, 0.0906)

CfgFloat	cfg_BBAphidAdultMortalityParaA ("BB_APHID_ADULT_MORTALITY_PARA_A", CFG_CUSTOM, 0.0004)

CfgFloat	cfg_BBAphidAdultMortalityParaB ("BB_APHID_ADULT_MORTALITY_PARA_B", CFG_CUSTOM, -0.0115)

CfgFloat	cfg_BBAphidAdultMortalityParaC ("BB_APHID_ADULT_MORTALITY_PARA_C", CFG_CUSTOM, 0.0906)

CfgFloat	cfg_PPAphidAdultMortalityParaA ("PP_APHID_ADULT_MORTALITY_PARA_A", CFG_CUSTOM, 0.0004)

CfgFloat	cfg_PPAphidAdultMortalityParaB ("PP_APHID_ADULT_MORTALITY_PARA_B", CFG_CUSTOM, -0.0115)

CfgFloat	cfg_PPAphidAdultMortalityParaC ("PP_APHID_ADULT_MORTALITY_PARA_C", CFG_CUSTOM, 0.0906)

CfgStr	cfg_EGAphidHostFile ("EG_APHID_HOST_FILE", CFG_CUSTOM, "Subpopulation/english_grain_aphid_host.txt")
	The host file for the aphids. The file for storing hosts for pea aphid. The file contains five rows, host switch flag (1 no switch, 2 switch between winter and summer), summer tole, summer tov, winter tole, winter tov (-1 means there is no host). When the aphids dont't change hosts between summer and winter, only the summer host arrays is used. More...

CfgStr	cfg_PEAAphidHostFile ("PEA_APHID_HOST_FILE", CFG_CUSTOM, "Subpopulation/pea_aphid_host.txt")

CfgStr	cfg_BBAphidHostFile ("BB_APHID_HOST_FILE", CFG_CUSTOM, "Subpopulation/black_bean_aphid_host.txt")

CfgStr	cfg_PPAphidHostFile ("PP_APHID_HOST_FILE", CFG_CUSTOM, "Subpopulation/peach_potato_aphid_host.txt")

CfgArray_Double	cfg_EGAphidDevelopmentBaseTempArray ("EG_APHID_DEVELOPMENT_BASE_TEMP_ARRAY", CFG_CUSTOM, 9, vector< double >{3.5, 2.73, 2.73, 2.73, 2.73, 2.73, 2.73, 2.73, 2.73})
	The base development temperatures for the aphids. More...

CfgArray_Double	cfg_PEAAphidDevelopmentBaseTempArray ("PEA_APHID_DEVELOPMENT_BASE_TEMP_ARRAY", CFG_CUSTOM, 9, vector< double >{3.5, 2.73, 2.73, 2.73, 2.73, 2.73, 2.73, 2.73, 2.73})

CfgArray_Double	cfg_BBAphidDevelopmentBaseTempArray ("BB_APHID_DEVELOPMENT_BASE_TEMP_ARRAY", CFG_CUSTOM, 9, vector< double >{3.5, 2.73, 2.73, 2.73, 2.73, 2.73, 2.73, 2.73, 2.73})

CfgArray_Double	cfg_PPAphidDevelopmentBaseTempArray ("PP_APHID_DEVELOPMENT_BASE_TEMP_ARRAY", CFG_CUSTOM, 9, vector< double >{3.5, 4, 4, 4, 4, 2.73, 2.73, 2.73, 2.73})

CfgArray_Double	cfg_EGAphidDevelopmentTurningTempArray ("EG_APHID_DEVELOPMENT_TURNING_TEMP_ARRAY", CFG_CUSTOM, 9, vector< double >{4, 3.5, 3.5, 3.5, 3.5, 10, 10, 10, 10})
	The turning temperatures for calculate degree days. This value should be larger than the base development temperature. More...

CfgArray_Double	cfg_PEAAphidDevelopmentTurningTempArray ("PEA_APHID_DEVELOPMENT_TURNING_TEMP_ARRAY", CFG_CUSTOM, 9, vector< double >{4, 3.5, 3.5, 3.5, 3.5, 10, 10, 10, 10})

CfgArray_Double	cfg_BBAphidDevelopmentTurningTempArray ("BB_APHID_DEVELOPMENT_TURNING_TEMP_ARRAY", CFG_CUSTOM, 9, vector< double >{4, 3.5, 3.5, 3.5, 3.5, 10, 10, 10, 10})

CfgArray_Double	cfg_PPAphidDevelopmentTurningTempArray ("PP_APHID_DEVELOPMENT_TURNING_TEMP_ARRAY", CFG_CUSTOM, 9, vector< double >{4, 4.5, 4.5, 4.5, 4.5, 10, 10, 10, 10})

CfgBool	cfg_EGAphidDualLinearModelFlagDD ("EG_APHID_DUAL_LINEAR_MODEL_FLAG_DD", CFG_CUSTOM, true)
	The flag control whether dual linear models are used for accumulating degree days. More...

CfgBool	cfg_PEAAphidDualLinearModelFlagDD ("PEA_APHID_DUAL_LINEAR_MODEL_FLAG_DD", CFG_CUSTOM, true)

CfgBool	cfg_BBAphidDualLinearModelFlagDD ("BB_APHID_DUAL_LINEAR_MODEL_FLAG_DD", CFG_CUSTOM, true)

CfgBool	cfg_PPAphidDualLinearModelFlagDD ("PP_APHID_DUAL_LINEAR_MODEL_FLAG_DD", CFG_CUSTOM, true)

CfgFloat	cfg_EGAphidEggStartingADD ("EG_APHID_EGG_STARTING_ADD", CFG_CUSTOM, 0)
	The starting degree days for eggs when the simulation starts. More...

CfgFloat	cfg_PEAAphidEggStartingADD ("PEA_APHID_EGG_STARTING_ADD", CFG_CUSTOM, 0)

CfgFloat	cfg_BBAphidEggStartingADD ("BB_APHID_EGG_STARTING_ADD", CFG_CUSTOM, 0)

CfgFloat	cfg_PPAphidEggStartingADD ("PP_APHID_EGG_STARTING_ADD", CFG_CUSTOM, 0)

CfgFloat	cfg_EGAphidEggHatchChanceParaA ("EG_APHID_EGG_HATCH_CHANCE_PARA_A", CFG_CUSTOM, 0.0029)
	The parameters to calculate the hatch chance of eggs. More...

CfgFloat	cfg_EGAphidEggHatchChanceParaB ("EG_APHID_EGG_HATCH_CHANCE_PARA_B", CFG_CUSTOM, -0.16)

CfgFloat	cfg_PEAAphidEggHatchChanceParaA ("PEA_APHID_EGG_HATCH_CHANCE_PARA_A", CFG_CUSTOM, 0.0029)

CfgFloat	cfg_PEAAphidEggHatchChanceParaB ("PEA_APHID_EGG_HATCH_CHANCE_PARA_B", CFG_CUSTOM, -0.233)

CfgFloat	cfg_BBAphidEggHatchChanceParaA ("BB_APHID_EGG_HATCH_CHANCE_PARA_A", CFG_CUSTOM, 0.0029)

CfgFloat	cfg_BBAphidEggHatchChanceParaB ("BB_APHID_EGG_HATCH_CHANCE_PARA_B", CFG_CUSTOM, -0.16)

CfgFloat	cfg_PPAphidEggHatchChanceParaA ("PP_APHID_EGG_HATCH_CHANCE_PARA_A", CFG_CUSTOM, 0.0029)

CfgFloat	cfg_PPAphidEggHatchChanceParaB ("PP_APHID_EGG_HATCH_CHANCE_PARA_B", CFG_CUSTOM, -0.16)

CfgFloat	cfg_EGAphidEggHatchDelayThreshold ("EG_APHID_EGG_HATCH_DELAY_THRESHOLD", CFG_CUSTOM, 0.9)
	The parameter in degree days to delay the egg when the hatch chance is above the given threshold. This is to stop the eggs hatch at the same day since they start to accumulate degree days from the beginning of a year. More...

CfgFloat	cfg_PEAAphidEggHatchDelayThreshold ("PEA_APHID_EGG_HATCH_DELAY_THRESHOLD", CFG_CUSTOM, 0.9)

CfgFloat	cfg_BBAphidEggHatchDelayThreshold ("BB_APHID_EGG_HATCH_DELAY_THRESHOLD", CFG_CUSTOM, 0.9)

CfgFloat	cfg_PPAphidEggHatchDelayThreshold ("PP_APHID_EGG_HATCH_DELAY_THRESHOLD", CFG_CUSTOM, 0.9)

CfgFloat	cfg_EGAphidEggHatchDelayDD ("EG_APHID_EGG_HATCH_DELAY_DD", CFG_CUSTOM, 10)

CfgFloat	cfg_PEAAphidEggHatchDelayDD ("PEA_APHID_EGG_HATCH_DELAY_DD", CFG_CUSTOM, 10)

CfgFloat	cfg_BBAphidEggHatchDelayDD ("BB_APHID_EGG_HATCH_DELAY_DD", CFG_CUSTOM, 10)

CfgFloat	cfg_PPAphidEggHatchDelayDD ("PP_APHID_EGG_HATCH_DELAY_DD", CFG_CUSTOM, 10)

CfgFloat	cfg_EGAphidNymphDevDayDegWing ("EG_APHID_NYMPH_DEV_DAY_DEG_WING", CFG_CUSTOM, 142)
	The development parameters for Nymphs. More...

CfgFloat	cfg_EGAphidNymphDevDayDegWingStd ("EG_APHID_NYMPH_DEV_DAY_DEG_WING_STD", CFG_CUSTOM, 10.33)

CfgFloat	cfg_EGAphidNymphDevDayDegNoWing ("EG_APHID_NYMPH_DEV_DAY_DEG_NO_WING", CFG_CUSTOM, 133)

CfgFloat	cfg_EGAphidNymphDevDayDegNoWingStd ("EG_APHID_NYMPH_DEV_DAY_DEG_NO_WING_STD", CFG_CUSTOM, 10.33)

CfgFloat	cfg_PEAAphidNymphDevDayDegWing ("PEA_APHID_NYMPH_DEV_DAY_DEG_WING", CFG_CUSTOM, 138)

CfgFloat	cfg_PEAAphidNymphDevDayDegWingStd ("PEA_APHID_NYMPH_DEV_DAY_DEG_WING_STD", CFG_CUSTOM, 4.48)

CfgFloat	cfg_PEAAphidNymphDevDayDegNoWing ("PEA_APHID_NYMPH_DEV_DAY_DEG_NO_WING", CFG_CUSTOM, 128)

CfgFloat	cfg_PEAAphidNymphDevDayDegNoWingStd ("PEA_APHID_NYMPH_DEV_DAY_DEG_NO_WING_STD", CFG_CUSTOM, 2.62)

CfgFloat	cfg_BBAphidNymphDevDayDegWing ("BB_APHID_NYMPH_DEV_DAY_DEG_WING", CFG_CUSTOM, 150)

CfgFloat	cfg_BBAphidNymphDevDayDegWingStd ("BB_APHID_NYMPH_DEV_DAY_DEG_WING_STD", CFG_CUSTOM, 4.48)

CfgFloat	cfg_BBAphidNymphDevDayDegNoWing ("BB_APHID_NYMPH_DEV_DAY_DEG_NO_WING", CFG_CUSTOM, 140)

CfgFloat	cfg_BBAphidNymphDevDayDegNoWingStd ("BB_APHID_NYMPH_DEV_DAY_DEG_NO_WING_STD", CFG_CUSTOM, 15.72)

CfgFloat	cfg_PPAphidNymphDevDayDegWing ("PP_APHID_NYMPH_DEV_DAY_DEG_WING", CFG_CUSTOM, 148.59)

CfgFloat	cfg_PPAphidNymphDevDayDegWingStd ("PP_APHID_NYMPH_DEV_DAY_DEG_WING_STD", CFG_CUSTOM, 4.48)

CfgFloat	cfg_PPAphidNymphDevDayDegNoWing ("PP_APHID_NYMPH_DEV_DAY_DEG_NO_WING", CFG_CUSTOM, 140.25)

CfgFloat	cfg_PPAphidNymphDevDayDegNoWingStd ("PP_APHID_NYMPH_DEV_DAY_DEG_NO_WING_STD", CFG_CUSTOM, 2.62)

CfgFloat	cfg_EGAphidLongevityParaA ("EG_APHID_ADULT_LONGEVITY_PARA_A", CFG_CUSTOM, -0.0047)
	The longevity parameters for adults. More...

CfgFloat	cfg_EGAphidLongevityParaB ("EG_APHID_ADULT_LONGEVITY_PARA_B", CFG_CUSTOM, 1.892)

CfgFloat	cfg_PEAAphidLongevityParaA ("PEA_APHID_ADULT_LONGEVITY_PARA_A", CFG_CUSTOM, -0.0047)

CfgFloat	cfg_PEAAphidLongevityParaB ("PEA_APHID_ADULT_LONGEVITY_PARA_B", CFG_CUSTOM, 1.892)

CfgFloat	cfg_BBAphidLongevityParaA ("BB_APHID_ADULT_LONGEVITY_PARA_A", CFG_CUSTOM, -0.0047)

CfgFloat	cfg_BBAphidLongevityParaB ("BB_APHID_ADULT_LONGEVITY_PARA_B", CFG_CUSTOM, 1.892)

CfgFloat	cfg_PPAphidLongevityParaA ("PP_APHID_ADULT_LONGEVITY_PARA_A", CFG_CUSTOM, -0.0047)

CfgFloat	cfg_PPAphidLongevityParaB ("PP_APHID_ADULT_LONGEVITY_PARA_B", CFG_CUSTOM, 1.892)

CfgFloat	cfg_EGAphidEggReproductionParaA ("EG_APHID_EGG_REPRODUCTION_PARA_A", CFG_CUSTOM, 0.2469)
	The parameters for egg reproduction. More...

CfgFloat	cfg_EGAphidEggReproductionParaB ("EG_APHID_EGG_REPRODUCTION_PARA_B", CFG_CUSTOM, -0.266)

CfgFloat	cfg_EGAphidEggReproductionParaC ("EG_APHID_EGG_REPRODUCTION_PARA_C", CFG_CUSTOM, 10.4)

CfgFloat	cfg_EGAphidEggReproductionParaSTD ("EG_APHID_EGG_REPRODUCTION_PARA_STD", CFG_CUSTOM, 0)

CfgFloat	cfg_PEAAphidEggReproductionParaA ("PEA_APHID_EGG_REPRODUCTION_PARA_A", CFG_CUSTOM, 0.2469)

CfgFloat	cfg_PEAAphidEggReproductionParaB ("PEA_APHID_EGG_REPRODUCTION_PARA_B", CFG_CUSTOM, -0.266)

CfgFloat	cfg_PEAAphidEggReproductionParaC ("PEA_APHID_EGG_REPRODUCTION_PARA_C", CFG_CUSTOM, 24.8)

CfgFloat	cfg_PEAAphidEggReproductionParaSTD ("PEA_APHID_EGG_REPRODUCTION_PARA_STD", CFG_CUSTOM, 0)

CfgFloat	cfg_BBAphidEggReproductionParaA ("BB_APHID_EGG_REPRODUCTION_PARA_A", CFG_CUSTOM, 0.2469)

CfgFloat	cfg_BBAphidEggReproductionParaB ("BB_APHID_EGG_REPRODUCTION_PARA_B", CFG_CUSTOM, -0.266)

CfgFloat	cfg_BBAphidEggReproductionParaC ("BB_APHID_EGG_REPRODUCTION_PARA_C", CFG_CUSTOM, 10)

CfgFloat	cfg_BBAphidEggReproductionParaSTD ("BB_APHID_EGG_REPRODUCTION_PARA_STD", CFG_CUSTOM, 8.3)

CfgFloat	cfg_PPAphidEggReproductionParaA ("PP_APHID_EGG_REPRODUCTION_PARA_A", CFG_CUSTOM, 0.2469)

CfgFloat	cfg_PPAphidEggReproductionParaB ("PP_APHID_EGG_REPRODUCTION_PARA_B", CFG_CUSTOM, -0.266)

CfgFloat	cfg_PPAphidEggReproductionParaC ("PP_APHID_EGG_REPRODUCTION_PARA_C", CFG_CUSTOM, 10.6)

CfgFloat	cfg_PPAphidEggReproductionParaSTD ("PP_APHID_EGG_REPRODUCTION_PARA_STD", CFG_CUSTOM, 8.3)

CfgFloat	cfg_EGAphidNymphReproductionParaA1 ("EG_APHID_NYMPH_REPRODUCTION_PARA_A1", CFG_CUSTOM, 0.0562)
	The parameters for nymph reproduction. More...

CfgFloat	cfg_EGAphidNymphReproductionParaB1 ("EG_APHID_NYMPH_REPRODUCTION_PARA_B1", CFG_CUSTOM, 1.1932)

CfgFloat	cfg_EGAphidNymphReproductionParaA2 ("EG_APHID_NYMPH_REPRODUCTION_PARA_A2", CFG_CUSTOM, -0.0146)

CfgFloat	cfg_EGAphidNymphReproductionParaB2 ("EG_APHID_NYMPH_REPRODUCTION_PARA_B2", CFG_CUSTOM, 4.6872)

CfgFloat	cfg_EGAphidNymphReproductionChangeADD ("EG_APHID_NYMPH_REPRODUCTION_CHANGE_ADD", CFG_CUSTOM, 0)

CfgFloat	cfg_EGAphidNymphReproductionTempWeightParaA ("EG_APHID_NYMPH_REPRODUCTION_TEMP_WEIGHT_PARA_A", CFG_CUSTOM, -0.006)

CfgFloat	cfg_EGAphidNymphReproductionTempWeightParaB ("EG_APHID_NYMPH_REPRODUCTION_TEMP_WEIGHT_PARA_B", CFG_CUSTOM, 0.264)

CfgFloat	cfg_EGAphidNymphReproductionTempWeightParaC ("EG_APHID_NYMPH_REPRODUCTION_TEMP_WEIGHT_PARA_C", CFG_CUSTOM, -1.93)

CfgFloat	cfg_PEAAphidNymphReproductionParaA1 ("PEA_APHID_NYMPH_REPRODUCTION_PARA_A1", CFG_CUSTOM, 0.0562)

CfgFloat	cfg_PEAAphidNymphReproductionParaB1 ("PEA_APHID_NYMPH_REPRODUCTION_PARA_B1", CFG_CUSTOM, 1.1932)

CfgFloat	cfg_PEAAphidNymphReproductionParaA2 ("PEA_APHID_NYMPH_REPRODUCTION_PARA_A2", CFG_CUSTOM, -0.0146)

CfgFloat	cfg_PEAAphidNymphReproductionParaB2 ("PEA_APHID_NYMPH_REPRODUCTION_PARA_B2", CFG_CUSTOM, 4.6872)

CfgFloat	cfg_PEAAphidNymphReproductionChangeADD ("PEA_APHID_NYMPH_REPRODUCTION_CHANGE_ADD", CFG_CUSTOM, 0)

CfgFloat	cfg_PEAAphidNymphReproductionTempWeightParaA ("PEA_APHID_NYMPH_REPRODUCTION_TEMP_WEIGHT_PARA_A", CFG_CUSTOM, -0.006)

CfgFloat	cfg_PEAAphidNymphReproductionTempWeightParaB ("PEA_APHID_NYMPH_REPRODUCTION_TEMP_WEIGHT_PARA_B", CFG_CUSTOM, 0.264)

CfgFloat	cfg_PEAAphidNymphReproductionTempWeightParaC ("PEA_APHID_NYMPH_REPRODUCTION_TEMP_WEIGHT_PARA_C", CFG_CUSTOM, -1.93)

CfgFloat	cfg_BBAphidNymphReproductionParaA1 ("BB_APHID_NYMPH_REPRODUCTION_PARA_A1", CFG_CUSTOM, 0.1199)

CfgFloat	cfg_BBAphidNymphReproductionParaB1 ("BB_APHID_NYMPH_REPRODUCTION_PARA_B1", CFG_CUSTOM, 2.9174)

CfgFloat	cfg_BBAphidNymphReproductionParaA2 ("BB_APHID_NYMPH_REPRODUCTION_PARA_A2", CFG_CUSTOM, -0.0332)

CfgFloat	cfg_BBAphidNymphReproductionParaB2 ("BB_APHID_NYMPH_REPRODUCTION_PARA_B2", CFG_CUSTOM, 9.9696)

CfgFloat	cfg_BBAphidNymphReproductionChangeADD ("BB_APHID_NYMPH_REPRODUCTION_CHANGE_ADD", CFG_CUSTOM, 66.5)

CfgFloat	cfg_BBAphidNymphReproductionTempWeightParaA ("BB_APHID_NYMPH_REPRODUCTION_TEMP_WEIGHT_PARA_A", CFG_CUSTOM, -0.006)

CfgFloat	cfg_BBAphidNymphReproductionTempWeightParaB ("BB_APHID_NYMPH_REPRODUCTION_TEMP_WEIGHT_PARA_B", CFG_CUSTOM, 0.204)

CfgFloat	cfg_BBAphidNymphReproductionTempWeightParaC ("BB_APHID_NYMPH_REPRODUCTION_TEMP_WEIGHT_PARA_C", CFG_CUSTOM, -0.76)

CfgFloat	cfg_PPAphidNymphReproductionParaA1 ("PP_APHID_NYMPH_REPRODUCTION_PARA_A1", CFG_CUSTOM, 0.1158)

CfgFloat	cfg_PPAphidNymphReproductionParaB1 ("PP_APHID_NYMPH_REPRODUCTION_PARA_B1", CFG_CUSTOM, -1)

CfgFloat	cfg_PPAphidNymphReproductionParaA2 ("PP_APHID_NYMPH_REPRODUCTION_PARA_A2", CFG_CUSTOM, -0.0087)

CfgFloat	cfg_PPAphidNymphReproductionParaB2 ("PP_APHID_NYMPH_REPRODUCTION_PARA_B2", CFG_CUSTOM, 4, 5)

CfgFloat	cfg_PPAphidNymphReproductionChangeADD ("PP_APHID_NYMPH_REPRODUCTION_CHANGE_ADD", CFG_CUSTOM, 50)

CfgFloat	cfg_PPAphidNymphReproductionTempWeightParaA ("PP_APHID_NYMPH_REPRODUCTION_TEMP_WEIGHT_PARA_A", CFG_CUSTOM, -0.006)

CfgFloat	cfg_PPAphidNymphReproductionTempWeightParaB ("PP_APHID_NYMPH_REPRODUCTION_TEMP_WEIGHT_PARA_B", CFG_CUSTOM, 0.204)

CfgFloat	cfg_PPAphidNymphReproductionTempWeightParaC ("PP_APHID_NYMPH_REPRODUCTION_TEMP_WEIGHT_PARA_C", CFG_CUSTOM, -0.76)

CfgFloat	cfg_EGAphidAlatePropParaA ("EG_APHID_ALATE_PROP_PARA_A", CFG_CUSTOM, 1.1)
	The parameters for alate proportion calculation. More...

CfgFloat	cfg_EGAphidAlatePropParaB ("EG_APHID_ALATE_PROP_PARA_B", CFG_CUSTOM, 10)

CfgFloat	cfg_EGAphidAlatePropParaC ("EG_APHID_ALATE_PROP_PARA_C", CFG_CUSTOM, 0)

CfgFloat	cfg_PEAAphidAlatePropParaA ("PEA_APHID_ALATE_PROP_PARA_A", CFG_CUSTOM, 1.1)

CfgFloat	cfg_PEAAphidAlatePropParaB ("PEA_APHID_ALATE_PROP_PARA_B", CFG_CUSTOM, 10)

CfgFloat	cfg_PEAAphidAlatePropParaC ("PEA_APHID_ALATE_PROP_PARA_C", CFG_CUSTOM, 0)

CfgFloat	cfg_BBAphidAlatePropParaA ("BB_APHID_ALATE_PROP_PARA_A", CFG_CUSTOM, 1.1)

CfgFloat	cfg_BBAphidAlatePropParaB ("BB_APHID_ALATE_PROP_PARA_B", CFG_CUSTOM, 10)

CfgFloat	cfg_BBAphidAlatePropParaC ("BB_APHID_ALATE_PROP_PARA_C", CFG_CUSTOM, 0)

CfgFloat	cfg_PPAphidAlatePropParaA ("PP_APHID_ALATE_PROP_PARA_A", CFG_CUSTOM, 1.1)

CfgFloat	cfg_PPAphidAlatePropParaB ("PP_APHID_ALATE_PROP_PARA_B", CFG_CUSTOM, 10)

CfgFloat	cfg_PPAphidAlatePropParaC ("PP_APHID_ALATE_PROP_PARA_C", CFG_CUSTOM, 0)

CfgFloat	cfg_EGAphidDayLengthMale ("EG_APHID_DAY_LENGTH_MALE", CFG_CUSTOM, 740)
	The day length to control male and female reproduction, this is used for pea and English grain aphids. More...

CfgFloat	cfg_EGAphidDayLengthFemale ("EG_APHID_DAY_LENGTH_FEMALE", CFG_CUSTOM, 700)

CfgFloat	cfg_PEAAphidDayLengthMale ("PEA_APHID_DAY_LENGTH_MALE", CFG_CUSTOM, 810)

CfgFloat	cfg_PEAAphidDayLengthFemale ("PEA_APHID_DAY_LENGTH_FEMALE", CFG_CUSTOM, 780)

CfgFloat	cfg_BBAphidSummerHostDayLength ("BB_APHID_SUMMER_HOST_DAY_LENGTH", CFG_CUSTOM, 600)
	The day length to control the winter and summer hosts, this used for black bean and peach potato aphids. More...

CfgFloat	cfg_BBAphidWinterHostDayLength ("BB_APHID_WINTER_HOST_DAY_LENGTH", CFG_CUSTOM, 1000)

CfgFloat	cfg_PPAphidSummerHostDayLength ("PP_APHID_SUMMER_HOST_DAY_LENGTH", CFG_CUSTOM, 600)

CfgFloat	cfg_PPAphidWinterHostDayLength ("PP_APHID_WINTER_HOST_DAY_LENGTH", CFG_CUSTOM, 1000)

CfgFloat	cfg_EGAphidSexualDevelopmentRequiredDdeg ("EG_APHID_SEXUAL_DEVELOPMENT_REQUIRED_DDEG", CFG_CUSTOM, 1157)
	The parameters to control the sexual reproduction. More...

CfgFloat	cfg_EGAphidSexualDevelopmentRequiredDdegStd ("EG_APHID_SEXUAL_DEVELOPMENT_REQUIRED_DDEG_STD", CFG_CUSTOM, 73)

CfgFloat	cfg_PEAphidSexualDevelopmentRequiredDdeg ("PEA_APHID_SEXUAL_DEVELOPMENT_REQUIRED_DDEG", CFG_CUSTOM, 1157)

CfgFloat	cfg_PEAphidSexualDevelopmentRequiredDdegStd ("PEA_APHID_SEXUAL_DEVELOPMENT_REQUIRED_DDEG_STD", CFG_CUSTOM, 73)

CfgFloat	cfg_BBAphidSexualDevelopmentRequiredDdeg ("BB_APHID_SEXUAL_DEVELOPMENT_REQUIRED_DDEG", CFG_CUSTOM, 1157)

CfgFloat	cfg_BBAphidSexualDevelopmentRequiredDdegStd ("BB_APHID_SEXUAL_DEVELOPMENT_REQUIRED_DDEG_STD", CFG_CUSTOM, 73)

CfgFloat	cfg_PPAphidSexualDevelopmentRequiredDdeg ("PP_APHID_SEXUAL_DEVELOPMENT_REQUIRED_DDEG", CFG_CUSTOM, 1157)

CfgFloat	cfg_PPAphidSexualDevelopmentRequiredDdegStd ("PP_APHID_SEXUAL_DEVELOPMENT_REQUIRED_DDEG_STD", CFG_CUSTOM, 73)

CfgArray_Double	cfg_EGAphidAdultMortalityDdeg ("EG_APHID_ADULT_MORTALITY_DDEG", CFG_CUSTOM, 9, vector< double >{100, 125, 150, 175, 200, 225, 250, 275, 300})
	The parameters to set the adult mortality based their accumulated degree days. More...

CfgArray_Double	cfg_EGAphidAdultMortality ("EG_APHID_ADULT_MORTALITY", CFG_CUSTOM, 9, vector< double >{0.017, 0.071211, 0.07667, 0.083037, 0.090556, 0.099573, 0.110585, 0.124334, 1})

CfgArray_Double	cfg_PEAAphidAdultMortalityDdeg ("PEA_APHID_ADULT_MORTALITY_DDEG", CFG_CUSTOM, 6, vector< double >{175, 200, 225, 250, 275, 300})

CfgArray_Double	cfg_PEAAphidAdultMortality ("PEA_APHID_ADULT_MORTALITY", CFG_CUSTOM, 6, vector< double >{0.048, 0.123424, 0.140803, 0.163877, 0.195997, 1})

CfgArray_Double	cfg_BBAphidAdultMortalityDdeg ("BB_APHID_ADULT_MORTALITY_DDEG", CFG_CUSTOM, 13, vector< double >{375, 400, 425, 450, 475, 500, 525, 550, 575, 600, 625, 650, 675})

CfgArray_Double	cfg_BBAphidAdultMortality ("BB_APHID_ADULT_MORTALITY", CFG_CUSTOM, 13, vector< double >{0.0776, 0.08673, 0.094967, 0.104932, 0.117233, 0.132802, 0.153139, 0.180832, 0.220751, 0.283286, 0.395257, 0.653595, 1})

CfgArray_Double	cfg_PPAphidAdultMortalityDdeg ("PP_APHID_ADULT_MORTALITY_DDEG", CFG_CUSTOM, 13, vector< double >{375, 400, 425, 450, 475, 500, 525, 550, 575, 600, 625, 650, 675})

CfgArray_Double	cfg_PPAphidAdultMortality ("PP_APHID_ADULT_MORTALITY", CFG_CUSTOM, 13, vector< double >{0.0776, 0.08673, 0.094967, 0.104932, 0.117233, 0.132802, 0.153139, 0.180832, 0.220751, 0.283286, 0.395257, 0.653595, 1})

CfgArray_Int	cfg_AphidCalibrationPolygonToStoreTOLE ("APHID_CALIBRATION_POLYGON_TO_STORE_TOLE", CFG_CUSTOM, 1, vector< int >{254})
	The parameters for debug. More...

CfgArray_Int	cfg_AphidCalibrationPolygonToStoreCROP ("APHID_CALIBRATION_POLYGON_TO_STORE_CROP", CFG_CUSTOM, 1, vector< int >{2911})

CfgBool	cfg_Subpopu_Base_Output_Used

Variable Documentation

◆ cfg_AphidCalibrationPolygonToStoreCROP

CfgArray_Int cfg_AphidCalibrationPolygonToStoreCROP("APHID_CALIBRATION_POLYGON_TO_STORE_CROP", CFG_CUSTOM, 1, vector< int >{2911})

◆ cfg_AphidCalibrationPolygonToStoreTOLE

CfgArray_Int cfg_AphidCalibrationPolygonToStoreTOLE("APHID_CALIBRATION_POLYGON_TO_STORE_TOLE", CFG_CUSTOM, 1, vector< int >{254})

The parameters for debug.

◆ cfg_AphidCellHeight

CfgInt cfg_AphidCellHeight("APHID_CELL_HEIGHT", CFG_CUSTOM, 10)

The height of the cell on the landscape for the aphids. -y, all the aphid species use the same parameter.

◆ cfg_AphidCellWidth

CfgInt cfg_AphidCellWidth("APHID_CELL_WIDTH", CFG_CUSTOM, 10)

The width of the cell on the landscape for the aphids. -x , all the aphid species use the same parameter.

◆ cfg_AphidEggStartingNumVec

CfgArray_Int cfg_AphidEggStartingNumVec("APHID_EGG_STARING_NUM_VEC", CFG_CUSTOM, 4, vector< int >{20000, 20000, 20000, 20000})

It controls the number of eggs to start the aphid simulations. All the aphid species use the same parameters.

Referenced by Aphid_Population_Manager::initialiseSimWithEggs().

◆ cfg_AphidLandingSurvivalRateVec

CfgArray_Double cfg_AphidLandingSurvivalRateVec("APHID_LANDING_SURVIVAL_RATE_VEC", CFG_CUSTOM, 4, vector< double >{1.0, 1.0, 1.0, 1.0})

The survival rate of landing for flying.

Referenced by Aphid_Population_Manager::Aphid_Population_Manager().

◆ cfg_AphidLifeStageNum

CfgInt cfg_AphidLifeStageNum("APHID_LIFE_STAGE_NUM", CFG_CUSTOM, 9)

The number of life stages for the aphids. All the species have the same number of life stages.

◆ cfg_AphidMaxAliveDay

CfgInt cfg_AphidMaxAliveDay("APHID_MAX_ALIVE_DAY", CFG_CUSTOM, 200)

The maximum alive days among all the life stages. All the species have the same number of life stages.

◆ cfg_AphidMaxLongDistance

CfgFloat cfg_AphidMaxLongDistance("APHID_MAX_LONG_DISTANCE", CFG_CUSTOM, 1500)

The longest distance that an aphid WITHOUT wings can fly. (meters)

◆ cfg_AphidMaxShortDistance

CfgFloat cfg_AphidMaxShortDistance("APHID_MAX_SHORT_DISTANCE", CFG_CUSTOM, 1000)

The longest distance that an aphid with wings can fly.

Note: These parameters control the long distance flying for the aphids, all the aphids species use the same parameters.

◆ cfg_AphidMaxWindSpeed

CfgFloat cfg_AphidMaxWindSpeed("APHID_MAX_WIND_SPEED", CFG_CUSTOM, 10)

The maximum speed that allows an aphid to fly.

◆ cfg_AphidMovMaskWindDirectionNum

CfgFloat cfg_AphidMovMaskWindDirectionNum("APHID_MOV_MASK_WIND_DIRECTION_NUM", CFG_CUSTOM, 4)

The number of wind directions used to calculate the movement masks.

◆ cfg_AphidMovMaskWindSpeedStepSize

CfgFloat cfg_AphidMovMaskWindSpeedStepSize("APHID_MOV_MASK_WIND_SPEED_STEP_SIZE", CFG_CUSTOM, 2)

The sampling number of wind speed used to calculate the movement masks.

◆ cfg_AphidPeakLongDistance

CfgFloat cfg_AphidPeakLongDistance("APHID_PEAK_LONG_DISTANCE", CFG_CUSTOM, 200)

The distance for the peak amount when the winged adults fly. (meters)

◆ cfg_AphidResultFileSuffix

CfgStr cfg_AphidResultFileSuffix("APHID_RESULT_FILE_SUFFIX", CFG_CUSTOM, "_result")

The suffix of the file name for storing the results.

Referenced by Aphid_Population_Manager::Aphid_Population_Manager().

◆ cfg_AphidResultPath

CfgStr cfg_AphidResultPath("APHID_RESULT_PATH", CFG_CUSTOM, "./")

The path to store the results.

Referenced by Aphid_Population_Manager::Aphid_Population_Manager().

◆ cfg_AphidScaleWindSpeed

CfgFloat cfg_AphidScaleWindSpeed("APHID_SCALE_WIND_SPEED", CFG_CUSTOM, 1.01)

The scale for the wind speed.

◆ cfg_AphidSpeciesName

CfgStr cfg_AphidSpeciesName("APHID_SPECIES_NAME", CFG_CUSTOM, "English grain aphid")

This variable decides which aphid species to run. The default one is the English grain aphid.

Referenced by CreatePopulationManager().

◆ cfg_BBAphidAdultMortality

CfgArray_Double cfg_BBAphidAdultMortality("BB_APHID_ADULT_MORTALITY", CFG_CUSTOM, 13, vector< double >{0.0776, 0.08673, 0.094967, 0.104932, 0.117233, 0.132802, 0.153139, 0.180832, 0.220751, 0.283286, 0.395257, 0.653595, 1})

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidAdultMortalityDdeg

CfgArray_Double cfg_BBAphidAdultMortalityDdeg("BB_APHID_ADULT_MORTALITY_DDEG", CFG_CUSTOM, 13, vector< double >{375, 400, 425, 450, 475, 500, 525, 550, 575, 600, 625, 650, 675})

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidAdultMortalityParaA

CfgFloat cfg_BBAphidAdultMortalityParaA("BB_APHID_ADULT_MORTALITY_PARA_A", CFG_CUSTOM, 0.0004)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidAdultMortalityParaB

CfgFloat cfg_BBAphidAdultMortalityParaB("BB_APHID_ADULT_MORTALITY_PARA_B", CFG_CUSTOM, -0.0115)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidAdultMortalityParaC

CfgFloat cfg_BBAphidAdultMortalityParaC("BB_APHID_ADULT_MORTALITY_PARA_C", CFG_CUSTOM, 0.0906)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidAlatePropParaA

CfgFloat cfg_BBAphidAlatePropParaA("BB_APHID_ALATE_PROP_PARA_A", CFG_CUSTOM, 1.1)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidAlatePropParaB

CfgFloat cfg_BBAphidAlatePropParaB("BB_APHID_ALATE_PROP_PARA_B", CFG_CUSTOM, 10)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidAlatePropParaC

CfgFloat cfg_BBAphidAlatePropParaC("BB_APHID_ALATE_PROP_PARA_C", CFG_CUSTOM, 0)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidDevelopmentBaseTempArray

CfgArray_Double cfg_BBAphidDevelopmentBaseTempArray("BB_APHID_DEVELOPMENT_BASE_TEMP_ARRAY", CFG_CUSTOM, 9, vector< double >{3.5, 2.73, 2.73, 2.73, 2.73, 2.73, 2.73, 2.73, 2.73})

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidDevelopmentTurningTempArray

CfgArray_Double cfg_BBAphidDevelopmentTurningTempArray("BB_APHID_DEVELOPMENT_TURNING_TEMP_ARRAY", CFG_CUSTOM, 9, vector< double >{4, 3.5, 3.5, 3.5, 3.5, 10, 10, 10, 10})

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidDualLinearModelFlagDD

CfgBool cfg_BBAphidDualLinearModelFlagDD("BB_APHID_DUAL_LINEAR_MODEL_FLAG_DD", CFG_CUSTOM, true)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidEggHatchChanceParaA

CfgFloat cfg_BBAphidEggHatchChanceParaA("BB_APHID_EGG_HATCH_CHANCE_PARA_A", CFG_CUSTOM, 0.0029)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidEggHatchChanceParaB

CfgFloat cfg_BBAphidEggHatchChanceParaB("BB_APHID_EGG_HATCH_CHANCE_PARA_B", CFG_CUSTOM, -0.16)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidEggHatchDelayDD

CfgFloat cfg_BBAphidEggHatchDelayDD("BB_APHID_EGG_HATCH_DELAY_DD", CFG_CUSTOM, 10)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidEggHatchDelayThreshold

CfgFloat cfg_BBAphidEggHatchDelayThreshold("BB_APHID_EGG_HATCH_DELAY_THRESHOLD", CFG_CUSTOM, 0.9)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidEggMortalityRate

CfgFloat cfg_BBAphidEggMortalityRate("BB_APHID_EGG_MORALITY_RATE", CFG_CUSTOM, 0.00595)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidEggMortalityRateStd

CfgFloat cfg_BBAphidEggMortalityRateStd("BB_APHID_EGG_MORALITY_RATE_STD", CFG_CUSTOM, 0.00024)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidEggReproductionParaA

CfgFloat cfg_BBAphidEggReproductionParaA("BB_APHID_EGG_REPRODUCTION_PARA_A", CFG_CUSTOM, 0.2469)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidEggReproductionParaB

CfgFloat cfg_BBAphidEggReproductionParaB("BB_APHID_EGG_REPRODUCTION_PARA_B", CFG_CUSTOM, -0.266)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidEggReproductionParaC

CfgFloat cfg_BBAphidEggReproductionParaC("BB_APHID_EGG_REPRODUCTION_PARA_C", CFG_CUSTOM, 10)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidEggReproductionParaSTD

CfgFloat cfg_BBAphidEggReproductionParaSTD("BB_APHID_EGG_REPRODUCTION_PARA_STD", CFG_CUSTOM, 8.3)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidEggStartingADD

CfgFloat cfg_BBAphidEggStartingADD("BB_APHID_EGG_STARTING_ADD", CFG_CUSTOM, 0)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidHostFile

CfgStr cfg_BBAphidHostFile("BB_APHID_HOST_FILE", CFG_CUSTOM, "Subpopulation/black_bean_aphid_host.txt")

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidLongevityParaA

CfgFloat cfg_BBAphidLongevityParaA("BB_APHID_ADULT_LONGEVITY_PARA_A", CFG_CUSTOM, -0.0047)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidLongevityParaB

CfgFloat cfg_BBAphidLongevityParaB("BB_APHID_ADULT_LONGEVITY_PARA_B", CFG_CUSTOM, 1.892)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidNymphDevDayDegNoWing

CfgFloat cfg_BBAphidNymphDevDayDegNoWing("BB_APHID_NYMPH_DEV_DAY_DEG_NO_WING", CFG_CUSTOM, 140)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidNymphDevDayDegNoWingStd

CfgFloat cfg_BBAphidNymphDevDayDegNoWingStd("BB_APHID_NYMPH_DEV_DAY_DEG_NO_WING_STD", CFG_CUSTOM, 15.72)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidNymphDevDayDegWing

CfgFloat cfg_BBAphidNymphDevDayDegWing("BB_APHID_NYMPH_DEV_DAY_DEG_WING", CFG_CUSTOM, 150)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidNymphDevDayDegWingStd

CfgFloat cfg_BBAphidNymphDevDayDegWingStd("BB_APHID_NYMPH_DEV_DAY_DEG_WING_STD", CFG_CUSTOM, 4.48)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidNymphMortalityParaA

CfgFloat cfg_BBAphidNymphMortalityParaA("BB_APHID_NYMPH_MORTALITY_PARA_A", CFG_CUSTOM, 0.0025)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidNymphMortalityParaB

CfgFloat cfg_BBAphidNymphMortalityParaB("BB_APHID_NYMPH_MORTALITY_PARA_B", CFG_CUSTOM, -0.059)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidNymphMortalityParaC

CfgFloat cfg_BBAphidNymphMortalityParaC("BB_APHID_NYMPH_MORTALITY_PARA_C", CFG_CUSTOM, 0.3081)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidNymphReproductionChangeADD

CfgFloat cfg_BBAphidNymphReproductionChangeADD("BB_APHID_NYMPH_REPRODUCTION_CHANGE_ADD", CFG_CUSTOM, 66.5)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidNymphReproductionParaA1

CfgFloat cfg_BBAphidNymphReproductionParaA1("BB_APHID_NYMPH_REPRODUCTION_PARA_A1", CFG_CUSTOM, 0.1199)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidNymphReproductionParaA2

CfgFloat cfg_BBAphidNymphReproductionParaA2("BB_APHID_NYMPH_REPRODUCTION_PARA_A2", CFG_CUSTOM, -0.0332)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidNymphReproductionParaB1

CfgFloat cfg_BBAphidNymphReproductionParaB1("BB_APHID_NYMPH_REPRODUCTION_PARA_B1", CFG_CUSTOM, 2.9174)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidNymphReproductionParaB2

CfgFloat cfg_BBAphidNymphReproductionParaB2("BB_APHID_NYMPH_REPRODUCTION_PARA_B2", CFG_CUSTOM, 9.9696)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidNymphReproductionTempWeightParaA

CfgFloat cfg_BBAphidNymphReproductionTempWeightParaA("BB_APHID_NYMPH_REPRODUCTION_TEMP_WEIGHT_PARA_A", CFG_CUSTOM, -0.006)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidNymphReproductionTempWeightParaB

CfgFloat cfg_BBAphidNymphReproductionTempWeightParaB("BB_APHID_NYMPH_REPRODUCTION_TEMP_WEIGHT_PARA_B", CFG_CUSTOM, 0.204)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidNymphReproductionTempWeightParaC

CfgFloat cfg_BBAphidNymphReproductionTempWeightParaC("BB_APHID_NYMPH_REPRODUCTION_TEMP_WEIGHT_PARA_C", CFG_CUSTOM, -0.76)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidSexualDevelopmentRequiredDdeg

CfgFloat cfg_BBAphidSexualDevelopmentRequiredDdeg("BB_APHID_SEXUAL_DEVELOPMENT_REQUIRED_DDEG", CFG_CUSTOM, 1157)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidSexualDevelopmentRequiredDdegStd

CfgFloat cfg_BBAphidSexualDevelopmentRequiredDdegStd("BB_APHID_SEXUAL_DEVELOPMENT_REQUIRED_DDEG_STD", CFG_CUSTOM, 73)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidSummerHostDayLength

CfgFloat cfg_BBAphidSummerHostDayLength("BB_APHID_SUMMER_HOST_DAY_LENGTH", CFG_CUSTOM, 600)

The day length to control the winter and summer hosts, this used for black bean and peach potato aphids.

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_BBAphidWinterHostDayLength

CfgFloat cfg_BBAphidWinterHostDayLength("BB_APHID_WINTER_HOST_DAY_LENGTH", CFG_CUSTOM, 1000)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidAdultMortality

CfgArray_Double cfg_EGAphidAdultMortality("EG_APHID_ADULT_MORTALITY", CFG_CUSTOM, 9, vector< double >{0.017, 0.071211, 0.07667, 0.083037, 0.090556, 0.099573, 0.110585, 0.124334, 1})

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidAdultMortalityDdeg

CfgArray_Double cfg_EGAphidAdultMortalityDdeg("EG_APHID_ADULT_MORTALITY_DDEG", CFG_CUSTOM, 9, vector< double >{100, 125, 150, 175, 200, 225, 250, 275, 300})

The parameters to set the adult mortality based their accumulated degree days.

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidAdultMortalityParaA

CfgFloat cfg_EGAphidAdultMortalityParaA("EG_APHID_ADULT_MORTALITY_PARA_A", CFG_CUSTOM, 0.0004)

The temperature related morality rate for Aphid adults.

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidAdultMortalityParaB

CfgFloat cfg_EGAphidAdultMortalityParaB("EG_APHID_ADULT_MORTALITY_PARA_B", CFG_CUSTOM, -0.0115)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidAdultMortalityParaC

CfgFloat cfg_EGAphidAdultMortalityParaC("EG_APHID_ADULT_MORTALITY_PARA_C", CFG_CUSTOM, 0.0906)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidAlatePropParaA

CfgFloat cfg_EGAphidAlatePropParaA("EG_APHID_ALATE_PROP_PARA_A", CFG_CUSTOM, 1.1)

The parameters for alate proportion calculation.

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidAlatePropParaB

CfgFloat cfg_EGAphidAlatePropParaB("EG_APHID_ALATE_PROP_PARA_B", CFG_CUSTOM, 10)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidAlatePropParaC

CfgFloat cfg_EGAphidAlatePropParaC("EG_APHID_ALATE_PROP_PARA_C", CFG_CUSTOM, 0)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidDayLengthFemale

CfgFloat cfg_EGAphidDayLengthFemale("EG_APHID_DAY_LENGTH_FEMALE", CFG_CUSTOM, 700)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidDayLengthMale

CfgFloat cfg_EGAphidDayLengthMale("EG_APHID_DAY_LENGTH_MALE", CFG_CUSTOM, 740)

The day length to control male and female reproduction, this is used for pea and English grain aphids.

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidDevelopmentBaseTempArray

CfgArray_Double cfg_EGAphidDevelopmentBaseTempArray("EG_APHID_DEVELOPMENT_BASE_TEMP_ARRAY", CFG_CUSTOM, 9, vector< double >{3.5, 2.73, 2.73, 2.73, 2.73, 2.73, 2.73, 2.73, 2.73})

The base development temperatures for the aphids.

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidDevelopmentTurningTempArray

CfgArray_Double cfg_EGAphidDevelopmentTurningTempArray("EG_APHID_DEVELOPMENT_TURNING_TEMP_ARRAY", CFG_CUSTOM, 9, vector< double >{4, 3.5, 3.5, 3.5, 3.5, 10, 10, 10, 10})

The turning temperatures for calculate degree days. This value should be larger than the base development temperature.

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidDualLinearModelFlagDD

CfgBool cfg_EGAphidDualLinearModelFlagDD("EG_APHID_DUAL_LINEAR_MODEL_FLAG_DD", CFG_CUSTOM, true)

The flag control whether dual linear models are used for accumulating degree days.

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidEggHatchChanceParaA

CfgFloat cfg_EGAphidEggHatchChanceParaA("EG_APHID_EGG_HATCH_CHANCE_PARA_A", CFG_CUSTOM, 0.0029)

The parameters to calculate the hatch chance of eggs.

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidEggHatchChanceParaB

CfgFloat cfg_EGAphidEggHatchChanceParaB("EG_APHID_EGG_HATCH_CHANCE_PARA_B", CFG_CUSTOM, -0.16)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidEggHatchDelayDD

CfgFloat cfg_EGAphidEggHatchDelayDD("EG_APHID_EGG_HATCH_DELAY_DD", CFG_CUSTOM, 10)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidEggHatchDelayThreshold

CfgFloat cfg_EGAphidEggHatchDelayThreshold("EG_APHID_EGG_HATCH_DELAY_THRESHOLD", CFG_CUSTOM, 0.9)

The parameter in degree days to delay the egg when the hatch chance is above the given threshold. This is to stop the eggs hatch at the same day since they start to accumulate degree days from the beginning of a year.

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidEggMortalityRate

CfgFloat cfg_EGAphidEggMortalityRate("EG_APHID_EGG_MORALITY_RATE", CFG_CUSTOM, 0.00595)

The morality rate for Aphid eggs.

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidEggMortalityRateStd

CfgFloat cfg_EGAphidEggMortalityRateStd("EG_APHID_EGG_MORALITY_RATE_STD", CFG_CUSTOM, 0.00024)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidEggReproductionParaA

CfgFloat cfg_EGAphidEggReproductionParaA("EG_APHID_EGG_REPRODUCTION_PARA_A", CFG_CUSTOM, 0.2469)

The parameters for egg reproduction.

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidEggReproductionParaB

CfgFloat cfg_EGAphidEggReproductionParaB("EG_APHID_EGG_REPRODUCTION_PARA_B", CFG_CUSTOM, -0.266)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidEggReproductionParaC

CfgFloat cfg_EGAphidEggReproductionParaC("EG_APHID_EGG_REPRODUCTION_PARA_C", CFG_CUSTOM, 10.4)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidEggReproductionParaSTD

CfgFloat cfg_EGAphidEggReproductionParaSTD("EG_APHID_EGG_REPRODUCTION_PARA_STD", CFG_CUSTOM, 0)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidEggStartingADD

CfgFloat cfg_EGAphidEggStartingADD("EG_APHID_EGG_STARTING_ADD", CFG_CUSTOM, 0)

The starting degree days for eggs when the simulation starts.

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidHostFile

CfgStr cfg_EGAphidHostFile("EG_APHID_HOST_FILE", CFG_CUSTOM, "Subpopulation/english_grain_aphid_host.txt")

The host file for the aphids. The file for storing hosts for pea aphid. The file contains five rows, host switch flag (1 no switch, 2 switch between winter and summer), summer tole, summer tov, winter tole, winter tov (-1 means there is no host). When the aphids dont't change hosts between summer and winter, only the summer host arrays is used.

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidLongevityParaA

CfgFloat cfg_EGAphidLongevityParaA("EG_APHID_ADULT_LONGEVITY_PARA_A", CFG_CUSTOM, -0.0047)

The longevity parameters for adults.

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidLongevityParaB

CfgFloat cfg_EGAphidLongevityParaB("EG_APHID_ADULT_LONGEVITY_PARA_B", CFG_CUSTOM, 1.892)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidNymphDevDayDegNoWing

CfgFloat cfg_EGAphidNymphDevDayDegNoWing("EG_APHID_NYMPH_DEV_DAY_DEG_NO_WING", CFG_CUSTOM, 133)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidNymphDevDayDegNoWingStd

CfgFloat cfg_EGAphidNymphDevDayDegNoWingStd("EG_APHID_NYMPH_DEV_DAY_DEG_NO_WING_STD", CFG_CUSTOM, 10.33)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidNymphDevDayDegWing

CfgFloat cfg_EGAphidNymphDevDayDegWing("EG_APHID_NYMPH_DEV_DAY_DEG_WING", CFG_CUSTOM, 142)

The development parameters for Nymphs.

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidNymphDevDayDegWingStd

CfgFloat cfg_EGAphidNymphDevDayDegWingStd("EG_APHID_NYMPH_DEV_DAY_DEG_WING_STD", CFG_CUSTOM, 10.33)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidNymphMortalityParaA

CfgFloat cfg_EGAphidNymphMortalityParaA("EG_APHID_NYMPH_MORTALITY_PARA_A", CFG_CUSTOM, 0.0004)

The temperature related morality rate for Aphid nymphs and adults.

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidNymphMortalityParaB

CfgFloat cfg_EGAphidNymphMortalityParaB("EG_APHID_NYMPH_MORTALITY_PARA_B", CFG_CUSTOM, -0.0115)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidNymphMortalityParaC

CfgFloat cfg_EGAphidNymphMortalityParaC("EG_APHID_NYMPH_MORTALITY_PARA_C", CFG_CUSTOM, 0.0906)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidNymphReproductionChangeADD

CfgFloat cfg_EGAphidNymphReproductionChangeADD("EG_APHID_NYMPH_REPRODUCTION_CHANGE_ADD", CFG_CUSTOM, 0)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidNymphReproductionParaA1

CfgFloat cfg_EGAphidNymphReproductionParaA1("EG_APHID_NYMPH_REPRODUCTION_PARA_A1", CFG_CUSTOM, 0.0562)

The parameters for nymph reproduction.

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidNymphReproductionParaA2

CfgFloat cfg_EGAphidNymphReproductionParaA2("EG_APHID_NYMPH_REPRODUCTION_PARA_A2", CFG_CUSTOM, -0.0146)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidNymphReproductionParaB1

CfgFloat cfg_EGAphidNymphReproductionParaB1("EG_APHID_NYMPH_REPRODUCTION_PARA_B1", CFG_CUSTOM, 1.1932)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidNymphReproductionParaB2

CfgFloat cfg_EGAphidNymphReproductionParaB2("EG_APHID_NYMPH_REPRODUCTION_PARA_B2", CFG_CUSTOM, 4.6872)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidNymphReproductionTempWeightParaA

CfgFloat cfg_EGAphidNymphReproductionTempWeightParaA("EG_APHID_NYMPH_REPRODUCTION_TEMP_WEIGHT_PARA_A", CFG_CUSTOM, -0.006)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidNymphReproductionTempWeightParaB

CfgFloat cfg_EGAphidNymphReproductionTempWeightParaB("EG_APHID_NYMPH_REPRODUCTION_TEMP_WEIGHT_PARA_B", CFG_CUSTOM, 0.264)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidNymphReproductionTempWeightParaC

CfgFloat cfg_EGAphidNymphReproductionTempWeightParaC("EG_APHID_NYMPH_REPRODUCTION_TEMP_WEIGHT_PARA_C", CFG_CUSTOM, -1.93)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidSexualDevelopmentRequiredDdeg

CfgFloat cfg_EGAphidSexualDevelopmentRequiredDdeg("EG_APHID_SEXUAL_DEVELOPMENT_REQUIRED_DDEG", CFG_CUSTOM, 1157)

The parameters to control the sexual reproduction.

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_EGAphidSexualDevelopmentRequiredDdegStd

CfgFloat cfg_EGAphidSexualDevelopmentRequiredDdegStd("EG_APHID_SEXUAL_DEVELOPMENT_REQUIRED_DDEG_STD", CFG_CUSTOM, 73)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidAdultMortality

CfgArray_Double cfg_PEAAphidAdultMortality("PEA_APHID_ADULT_MORTALITY", CFG_CUSTOM, 6, vector< double >{0.048, 0.123424, 0.140803, 0.163877, 0.195997, 1})

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidAdultMortalityDdeg

CfgArray_Double cfg_PEAAphidAdultMortalityDdeg("PEA_APHID_ADULT_MORTALITY_DDEG", CFG_CUSTOM, 6, vector< double >{175, 200, 225, 250, 275, 300})

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidAdultMortalityParaA

CfgFloat cfg_PEAAphidAdultMortalityParaA("PEA_APHID_ADULT_MORTALITY_PARA_A", CFG_CUSTOM, 0.0004)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidAdultMortalityParaB

CfgFloat cfg_PEAAphidAdultMortalityParaB("PEA_APHID_ADULT_MORTALITY_PARA_B", CFG_CUSTOM, -0.0115)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidAdultMortalityParaC

CfgFloat cfg_PEAAphidAdultMortalityParaC("PEA_APHID_ADULT_MORTALITY_PARA_C", CFG_CUSTOM, 0.0906)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidAlatePropParaA

CfgFloat cfg_PEAAphidAlatePropParaA("PEA_APHID_ALATE_PROP_PARA_A", CFG_CUSTOM, 1.1)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidAlatePropParaB

CfgFloat cfg_PEAAphidAlatePropParaB("PEA_APHID_ALATE_PROP_PARA_B", CFG_CUSTOM, 10)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidAlatePropParaC

CfgFloat cfg_PEAAphidAlatePropParaC("PEA_APHID_ALATE_PROP_PARA_C", CFG_CUSTOM, 0)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidDayLengthFemale

CfgFloat cfg_PEAAphidDayLengthFemale("PEA_APHID_DAY_LENGTH_FEMALE", CFG_CUSTOM, 780)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidDayLengthMale

CfgFloat cfg_PEAAphidDayLengthMale("PEA_APHID_DAY_LENGTH_MALE", CFG_CUSTOM, 810)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidDevelopmentBaseTempArray

CfgArray_Double cfg_PEAAphidDevelopmentBaseTempArray("PEA_APHID_DEVELOPMENT_BASE_TEMP_ARRAY", CFG_CUSTOM, 9, vector< double >{3.5, 2.73, 2.73, 2.73, 2.73, 2.73, 2.73, 2.73, 2.73})

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidDevelopmentTurningTempArray

CfgArray_Double cfg_PEAAphidDevelopmentTurningTempArray("PEA_APHID_DEVELOPMENT_TURNING_TEMP_ARRAY", CFG_CUSTOM, 9, vector< double >{4, 3.5, 3.5, 3.5, 3.5, 10, 10, 10, 10})

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidDualLinearModelFlagDD

CfgBool cfg_PEAAphidDualLinearModelFlagDD("PEA_APHID_DUAL_LINEAR_MODEL_FLAG_DD", CFG_CUSTOM, true)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidEggHatchChanceParaA

CfgFloat cfg_PEAAphidEggHatchChanceParaA("PEA_APHID_EGG_HATCH_CHANCE_PARA_A", CFG_CUSTOM, 0.0029)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidEggHatchChanceParaB

CfgFloat cfg_PEAAphidEggHatchChanceParaB("PEA_APHID_EGG_HATCH_CHANCE_PARA_B", CFG_CUSTOM, -0.233)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidEggHatchDelayDD

CfgFloat cfg_PEAAphidEggHatchDelayDD("PEA_APHID_EGG_HATCH_DELAY_DD", CFG_CUSTOM, 10)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidEggHatchDelayThreshold

CfgFloat cfg_PEAAphidEggHatchDelayThreshold("PEA_APHID_EGG_HATCH_DELAY_THRESHOLD", CFG_CUSTOM, 0.9)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidEggMortalityRate

CfgFloat cfg_PEAAphidEggMortalityRate("PEA_APHID_EGG_MORALITY_RATE", CFG_CUSTOM, 0.00595)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidEggMortalityRateStd

CfgFloat cfg_PEAAphidEggMortalityRateStd("PEA_APHID_EGG_MORALITY_RATE_STD", CFG_CUSTOM, 0.00024)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidEggReproductionParaA

CfgFloat cfg_PEAAphidEggReproductionParaA("PEA_APHID_EGG_REPRODUCTION_PARA_A", CFG_CUSTOM, 0.2469)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidEggReproductionParaB

CfgFloat cfg_PEAAphidEggReproductionParaB("PEA_APHID_EGG_REPRODUCTION_PARA_B", CFG_CUSTOM, -0.266)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidEggReproductionParaC

CfgFloat cfg_PEAAphidEggReproductionParaC("PEA_APHID_EGG_REPRODUCTION_PARA_C", CFG_CUSTOM, 24.8)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidEggReproductionParaSTD

CfgFloat cfg_PEAAphidEggReproductionParaSTD("PEA_APHID_EGG_REPRODUCTION_PARA_STD", CFG_CUSTOM, 0)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidEggStartingADD

CfgFloat cfg_PEAAphidEggStartingADD("PEA_APHID_EGG_STARTING_ADD", CFG_CUSTOM, 0)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidHostFile

CfgStr cfg_PEAAphidHostFile("PEA_APHID_HOST_FILE", CFG_CUSTOM, "Subpopulation/pea_aphid_host.txt")

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidLongevityParaA

CfgFloat cfg_PEAAphidLongevityParaA("PEA_APHID_ADULT_LONGEVITY_PARA_A", CFG_CUSTOM, -0.0047)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidLongevityParaB

CfgFloat cfg_PEAAphidLongevityParaB("PEA_APHID_ADULT_LONGEVITY_PARA_B", CFG_CUSTOM, 1.892)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidNymphDevDayDegNoWing

CfgFloat cfg_PEAAphidNymphDevDayDegNoWing("PEA_APHID_NYMPH_DEV_DAY_DEG_NO_WING", CFG_CUSTOM, 128)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidNymphDevDayDegNoWingStd

CfgFloat cfg_PEAAphidNymphDevDayDegNoWingStd("PEA_APHID_NYMPH_DEV_DAY_DEG_NO_WING_STD", CFG_CUSTOM, 2.62)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidNymphDevDayDegWing

CfgFloat cfg_PEAAphidNymphDevDayDegWing("PEA_APHID_NYMPH_DEV_DAY_DEG_WING", CFG_CUSTOM, 138)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidNymphDevDayDegWingStd

CfgFloat cfg_PEAAphidNymphDevDayDegWingStd("PEA_APHID_NYMPH_DEV_DAY_DEG_WING_STD", CFG_CUSTOM, 4.48)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidNymphMortalityParaA

CfgFloat cfg_PEAAphidNymphMortalityParaA("PEA_APHID_NYMPH_MORTALITY_PARA_A", CFG_CUSTOM, 0.0004)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidNymphMortalityParaB

CfgFloat cfg_PEAAphidNymphMortalityParaB("PEA_APHID_NYMPH_MORTALITY_PARA_B", CFG_CUSTOM, -0.0115)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidNymphMortalityParaC

CfgFloat cfg_PEAAphidNymphMortalityParaC("PEA_APHID_NYMPH_MORTALITY_PARA_C", CFG_CUSTOM, 0.0906)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidNymphReproductionChangeADD

CfgFloat cfg_PEAAphidNymphReproductionChangeADD("PEA_APHID_NYMPH_REPRODUCTION_CHANGE_ADD", CFG_CUSTOM, 0)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidNymphReproductionParaA1

CfgFloat cfg_PEAAphidNymphReproductionParaA1("PEA_APHID_NYMPH_REPRODUCTION_PARA_A1", CFG_CUSTOM, 0.0562)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidNymphReproductionParaA2

CfgFloat cfg_PEAAphidNymphReproductionParaA2("PEA_APHID_NYMPH_REPRODUCTION_PARA_A2", CFG_CUSTOM, -0.0146)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidNymphReproductionParaB1

CfgFloat cfg_PEAAphidNymphReproductionParaB1("PEA_APHID_NYMPH_REPRODUCTION_PARA_B1", CFG_CUSTOM, 1.1932)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidNymphReproductionParaB2

CfgFloat cfg_PEAAphidNymphReproductionParaB2("PEA_APHID_NYMPH_REPRODUCTION_PARA_B2", CFG_CUSTOM, 4.6872)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidNymphReproductionTempWeightParaA

CfgFloat cfg_PEAAphidNymphReproductionTempWeightParaA("PEA_APHID_NYMPH_REPRODUCTION_TEMP_WEIGHT_PARA_A", CFG_CUSTOM, -0.006)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidNymphReproductionTempWeightParaB

CfgFloat cfg_PEAAphidNymphReproductionTempWeightParaB("PEA_APHID_NYMPH_REPRODUCTION_TEMP_WEIGHT_PARA_B", CFG_CUSTOM, 0.264)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAAphidNymphReproductionTempWeightParaC

CfgFloat cfg_PEAAphidNymphReproductionTempWeightParaC("PEA_APHID_NYMPH_REPRODUCTION_TEMP_WEIGHT_PARA_C", CFG_CUSTOM, -1.93)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAphidSexualDevelopmentRequiredDdeg

CfgFloat cfg_PEAphidSexualDevelopmentRequiredDdeg("PEA_APHID_SEXUAL_DEVELOPMENT_REQUIRED_DDEG", CFG_CUSTOM, 1157)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PEAphidSexualDevelopmentRequiredDdegStd

CfgFloat cfg_PEAphidSexualDevelopmentRequiredDdegStd("PEA_APHID_SEXUAL_DEVELOPMENT_REQUIRED_DDEG_STD", CFG_CUSTOM, 73)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidAdultMortality

CfgArray_Double cfg_PPAphidAdultMortality("PP_APHID_ADULT_MORTALITY", CFG_CUSTOM, 13, vector< double >{0.0776, 0.08673, 0.094967, 0.104932, 0.117233, 0.132802, 0.153139, 0.180832, 0.220751, 0.283286, 0.395257, 0.653595, 1})

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidAdultMortalityDdeg

CfgArray_Double cfg_PPAphidAdultMortalityDdeg("PP_APHID_ADULT_MORTALITY_DDEG", CFG_CUSTOM, 13, vector< double >{375, 400, 425, 450, 475, 500, 525, 550, 575, 600, 625, 650, 675})

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidAdultMortalityParaA

CfgFloat cfg_PPAphidAdultMortalityParaA("PP_APHID_ADULT_MORTALITY_PARA_A", CFG_CUSTOM, 0.0004)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidAdultMortalityParaB

CfgFloat cfg_PPAphidAdultMortalityParaB("PP_APHID_ADULT_MORTALITY_PARA_B", CFG_CUSTOM, -0.0115)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidAdultMortalityParaC

CfgFloat cfg_PPAphidAdultMortalityParaC("PP_APHID_ADULT_MORTALITY_PARA_C", CFG_CUSTOM, 0.0906)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidAlatePropParaA

CfgFloat cfg_PPAphidAlatePropParaA("PP_APHID_ALATE_PROP_PARA_A", CFG_CUSTOM, 1.1)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidAlatePropParaB

CfgFloat cfg_PPAphidAlatePropParaB("PP_APHID_ALATE_PROP_PARA_B", CFG_CUSTOM, 10)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidAlatePropParaC

CfgFloat cfg_PPAphidAlatePropParaC("PP_APHID_ALATE_PROP_PARA_C", CFG_CUSTOM, 0)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidDevelopmentBaseTempArray

CfgArray_Double cfg_PPAphidDevelopmentBaseTempArray("PP_APHID_DEVELOPMENT_BASE_TEMP_ARRAY", CFG_CUSTOM, 9, vector< double >{3.5, 4, 4, 4, 4, 2.73, 2.73, 2.73, 2.73})

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidDevelopmentTurningTempArray

CfgArray_Double cfg_PPAphidDevelopmentTurningTempArray("PP_APHID_DEVELOPMENT_TURNING_TEMP_ARRAY", CFG_CUSTOM, 9, vector< double >{4, 4.5, 4.5, 4.5, 4.5, 10, 10, 10, 10})

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidDualLinearModelFlagDD

CfgBool cfg_PPAphidDualLinearModelFlagDD("PP_APHID_DUAL_LINEAR_MODEL_FLAG_DD", CFG_CUSTOM, true)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidEggHatchChanceParaA

CfgFloat cfg_PPAphidEggHatchChanceParaA("PP_APHID_EGG_HATCH_CHANCE_PARA_A", CFG_CUSTOM, 0.0029)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidEggHatchChanceParaB

CfgFloat cfg_PPAphidEggHatchChanceParaB("PP_APHID_EGG_HATCH_CHANCE_PARA_B", CFG_CUSTOM, -0.16)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidEggHatchDelayDD

CfgFloat cfg_PPAphidEggHatchDelayDD("PP_APHID_EGG_HATCH_DELAY_DD", CFG_CUSTOM, 10)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidEggHatchDelayThreshold

CfgFloat cfg_PPAphidEggHatchDelayThreshold("PP_APHID_EGG_HATCH_DELAY_THRESHOLD", CFG_CUSTOM, 0.9)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidEggMortalityRate

CfgFloat cfg_PPAphidEggMortalityRate("PP_APHID_EGG_MORALITY_RATE", CFG_CUSTOM, 0.00595)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidEggMortalityRateStd

CfgFloat cfg_PPAphidEggMortalityRateStd("PP_APHID_EGG_MORALITY_RATE_STD", CFG_CUSTOM, 0.00024)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidEggReproductionParaA

CfgFloat cfg_PPAphidEggReproductionParaA("PP_APHID_EGG_REPRODUCTION_PARA_A", CFG_CUSTOM, 0.2469)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidEggReproductionParaB

CfgFloat cfg_PPAphidEggReproductionParaB("PP_APHID_EGG_REPRODUCTION_PARA_B", CFG_CUSTOM, -0.266)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidEggReproductionParaC

CfgFloat cfg_PPAphidEggReproductionParaC("PP_APHID_EGG_REPRODUCTION_PARA_C", CFG_CUSTOM, 10.6)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidEggReproductionParaSTD

CfgFloat cfg_PPAphidEggReproductionParaSTD("PP_APHID_EGG_REPRODUCTION_PARA_STD", CFG_CUSTOM, 8.3)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidEggStartingADD

CfgFloat cfg_PPAphidEggStartingADD("PP_APHID_EGG_STARTING_ADD", CFG_CUSTOM, 0)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidHostFile

CfgStr cfg_PPAphidHostFile("PP_APHID_HOST_FILE", CFG_CUSTOM, "Subpopulation/peach_potato_aphid_host.txt")

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidLongevityParaA

CfgFloat cfg_PPAphidLongevityParaA("PP_APHID_ADULT_LONGEVITY_PARA_A", CFG_CUSTOM, -0.0047)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidLongevityParaB

CfgFloat cfg_PPAphidLongevityParaB("PP_APHID_ADULT_LONGEVITY_PARA_B", CFG_CUSTOM, 1.892)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidNymphDevDayDegNoWing

CfgFloat cfg_PPAphidNymphDevDayDegNoWing("PP_APHID_NYMPH_DEV_DAY_DEG_NO_WING", CFG_CUSTOM, 140.25)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidNymphDevDayDegNoWingStd

CfgFloat cfg_PPAphidNymphDevDayDegNoWingStd("PP_APHID_NYMPH_DEV_DAY_DEG_NO_WING_STD", CFG_CUSTOM, 2.62)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidNymphDevDayDegWing

CfgFloat cfg_PPAphidNymphDevDayDegWing("PP_APHID_NYMPH_DEV_DAY_DEG_WING", CFG_CUSTOM, 148.59)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidNymphDevDayDegWingStd

CfgFloat cfg_PPAphidNymphDevDayDegWingStd("PP_APHID_NYMPH_DEV_DAY_DEG_WING_STD", CFG_CUSTOM, 4.48)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidNymphMortalityParaA

CfgFloat cfg_PPAphidNymphMortalityParaA("PP_APHID_NYMPH_MORTALITY_PARA_A", CFG_CUSTOM, 0.0025)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidNymphMortalityParaB

CfgFloat cfg_PPAphidNymphMortalityParaB("PP_APHID_NYMPH_MORTALITY_PARA_B", CFG_CUSTOM, -0.059)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidNymphMortalityParaC

CfgFloat cfg_PPAphidNymphMortalityParaC("PP_APHID_NYMPH_MORTALITY_PARA_C", CFG_CUSTOM, 0.3081)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidNymphReproductionChangeADD

CfgFloat cfg_PPAphidNymphReproductionChangeADD("PP_APHID_NYMPH_REPRODUCTION_CHANGE_ADD", CFG_CUSTOM, 50)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidNymphReproductionParaA1

CfgFloat cfg_PPAphidNymphReproductionParaA1("PP_APHID_NYMPH_REPRODUCTION_PARA_A1", CFG_CUSTOM, 0.1158)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidNymphReproductionParaA2

CfgFloat cfg_PPAphidNymphReproductionParaA2("PP_APHID_NYMPH_REPRODUCTION_PARA_A2", CFG_CUSTOM, -0.0087)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidNymphReproductionParaB1

CfgFloat cfg_PPAphidNymphReproductionParaB1("PP_APHID_NYMPH_REPRODUCTION_PARA_B1", CFG_CUSTOM, -1)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidNymphReproductionParaB2

CfgFloat cfg_PPAphidNymphReproductionParaB2("PP_APHID_NYMPH_REPRODUCTION_PARA_B2", CFG_CUSTOM, 4, 5)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidNymphReproductionTempWeightParaA

CfgFloat cfg_PPAphidNymphReproductionTempWeightParaA("PP_APHID_NYMPH_REPRODUCTION_TEMP_WEIGHT_PARA_A", CFG_CUSTOM, -0.006)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidNymphReproductionTempWeightParaB

CfgFloat cfg_PPAphidNymphReproductionTempWeightParaB("PP_APHID_NYMPH_REPRODUCTION_TEMP_WEIGHT_PARA_B", CFG_CUSTOM, 0.204)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidNymphReproductionTempWeightParaC

CfgFloat cfg_PPAphidNymphReproductionTempWeightParaC("PP_APHID_NYMPH_REPRODUCTION_TEMP_WEIGHT_PARA_C", CFG_CUSTOM, -0.76)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidSexualDevelopmentRequiredDdeg

CfgFloat cfg_PPAphidSexualDevelopmentRequiredDdeg("PP_APHID_SEXUAL_DEVELOPMENT_REQUIRED_DDEG", CFG_CUSTOM, 1157)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidSexualDevelopmentRequiredDdegStd

CfgFloat cfg_PPAphidSexualDevelopmentRequiredDdegStd("PP_APHID_SEXUAL_DEVELOPMENT_REQUIRED_DDEG_STD", CFG_CUSTOM, 73)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidSummerHostDayLength

CfgFloat cfg_PPAphidSummerHostDayLength("PP_APHID_SUMMER_HOST_DAY_LENGTH", CFG_CUSTOM, 600)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_PPAphidWinterHostDayLength

CfgFloat cfg_PPAphidWinterHostDayLength("PP_APHID_WINTER_HOST_DAY_LENGTH", CFG_CUSTOM, 1000)

Referenced by Aphid_Population_Manager::initialisePopulation().

◆ cfg_Subpopu_Base_Output_Used

CfgBool cfg_Subpopu_Base_Output_Used

Referenced by Aphid_Population_Manager::Aphid_Population_Manager(), SubPopulation_Population_Manager::SubPopulation_Population_Manager(), and SubPopulation_Population_Manager::~SubPopulation_Population_Manager().

◆ g_farmmanager

FarmManager* g_farmmanager

Referenced by FarmManager::FarmManager(), Farm::ReadRotation(), and UserDefinedFarm::UserDefinedFarm().

◆ g_landscape_ptr

Landscape* g_landscape_ptr

Referenced by Landscape::BorderTest(), Aphid_Population_Manager::calOffspringStageEGandPEA(), Landscape::Landscape(), Aphid_Population_Manager::updateDevelopmentSeason(), and Aphid_Population_Manager::updateMortalityArrayShared().